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  • Top cofit genes for Atu1239 from Agrobacterium fabrum C58

    exopolysaccharide production protein
    SEED: lipopolysaccharide biosynthesis

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu1238 polysaccharide export protein 0.78 0.69
    2 Atu3777 hypothetical protein no 0.68
    3 Atu1236 polysaccharide biosynthesis glycosyltransferase 0.87 0.64
    4 Atu8188 hypothetical protein 0.79 0.64
    5 Atu0588 hypothetical protein no 0.63
    6 Atu2377 succinoglycan biosynthesis transport protein 0.76 0.60
    7 Atu0481 exopolysaccharide production protein no 0.59
    8 Atu2373 UDP-hexose transferase no 0.57
    9 Atu0480 polysaccharide biosynthesis protein no 0.57
    10 Atu0499 hypothetical protein 0.58 0.56
    11 Atu3860 hypothetical protein no 0.56
    12 Atu1235 hypothetical protein 0.82 0.56
    13 Atu1240 hypothetical protein 0.71 0.55
    14 Atu0530 UDP-galactose 4-epimerase 0.74 0.54
    15 Atu1237 glycosyl transferase 0.83 0.52
    16 Atu2375 UDP-hexose transferase 0.66 0.51
    17 Atu2372 UDP-hexose transferase no 0.50
    18 Atu0482 polysaccharide deacetylase no 0.42
    19 Atu2010 GGDEF family protein no 0.37
    20 Atu4162 two-component response regulator 0.24 0.37

    Or look for negative cofitness