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Cofit
Protein
Homologs
Top cofit genes for Atu1114 from
Agrobacterium fabrum C58
GGDEF family protein
SEED: GGDEF domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Atu3110
hypothetical protein
no
0.28
2
Atu0216
components of type IV pilus
no
0.28
3
Atu8117
hypothetical protein
no
0.25
4
Atu4795
LuxR family transcriptional regulator
no
0.25
5
Atu2474
ABC transporter, membrane spanning protein
no
0.24
6
Atu4776
formate dehydrogenase alpha subunit
no
0.24
7
Atu4301
hypothetical protein
no
0.24
8
Atu4724
hypothetical protein
no
0.24
9
Atu1724
hypothetical protein
no
0.24
10
Atu1256
cytochrome P450 hydroxylase
no
0.24
11
Atu4596
hypothetical protein
no
0.23
12
Atu4224
sarcosine oxidase beta subunit
no
0.23
13
Atu3810
LysR family transcriptional regulator
no
0.23
14
Atu3685
thioesterase, siderophore biosynthesis protein
no
0.23
15
Atu0217
components of type IV pilus
no
0.23
16
Atu2334
hypothetical protein
no
0.23
17
Atu4242
hypothetical protein
no
0.23
18
Atu0901
6-O-methylguanine-DNA methyltransferase
no
0.22
19
Atu6092
conserved hypothetical protein
no
0.22
20
Atu0940
PemK protein
no
0.22
Or look for
negative cofitness