Top cofit genes for Atu0977 from Agrobacterium fabrum C58

serine protease DO-like protease
SEED: HtrA protease/chaperone protein
KEGG:

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Atu2052		hypothetical protein	0.59	0.61
2	Atu2730		beta (1-->2) glucan biosynthesis protein	0.69	0.56
3	Atu0971		two component sensor kinase	0.53	0.55
4	Atu0979		two component sensor kinase	0.91	0.50
5	Atu2728		beta (1-->2) glucan export ATP-binding protein	0.61	0.50
6	Atu0499		hypothetical protein	no	0.50
7	Atu8167		putative transmembrane protein	no	0.50
8	Atu1838		ABC transporter, substrate binding protein (amino acid)	0.59	0.48
9	Atu2379		phosphomannomutase	no	0.48
10	Atu3311		phosphomannose isomerase	no	0.47
11	Atu2722		porin	0.53	0.47
12	Atu0978		two component response regulator	0.91	0.47
13	Atu2183		lipopolysaccharide core biosynthesis mannosyltransferase	no	0.46
14	Atu3353		mannose-1-phosphate guanylyltransferase	0.50	0.46
15	Atu0153		transcriptional regulator, Fur family	no	0.45
16	Atu0923		hypothetical protein	no	0.45
17	Atu2614		hypothetical protein	no	0.44
18	Atu1683		hypothetical protein	no	0.42
19	Atu2207		two component sensor kinase	0.35	0.42
20	Atu1364		ATP-dependent Clp protease, ATP-binding subunit	0.66	0.42

Or look for negative cofitness