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  • Top cofit genes for Atu0840 from Agrobacterium fabrum C58

    ATP-dependent DNA ligase
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    KEGG: DNA ligase (ATP)

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0494 large atp-dependant helicase-related protein 0.83 0.48
    2 Atu0495 hypothetical protein 0.64 0.28
    3 Atu0073 recF-like protein 0.89 0.21
    4 Atu1039 DNA repair protein RecO 0.60 0.20
    5 Atu0839 hypothetical protein 0.86 0.20
    6 Atu1780 ATP-dependent DNA helicase 0.69 0.18
    7 Atu1605 sugar fermentation stimulation protein 0.43 0.18
    8 Atu0093 Recombination protein 0.64 0.17
    9 Atu0867 aldo/keto reductase no 0.16
    10 Atu0209 hypothetical protein 0.54 0.16
    11 Atu0387 methyl-accepting chemotaxis protein no 0.16
    12 Atu8163 hypothetical protein no 0.16
    13 Atu0815 hypothetical protein no 0.16
    14 Atu4749 fructose transport system kinase no 0.15
    15 Atu1975 hypothetical protein no 0.15
    16 Atu2179 GGDEF family protein no 0.15
    17 Atu2669 RhtB family transporter no 0.15
    18 Atu0305 ABC transporter, substrate binding protein (sn-glycerol 3-phosphate) no 0.15
    19 Atu1836 hypothetical protein no 0.14
    20 Atu1853 hypothetical protein no 0.14

    Or look for negative cofitness