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  • Top cofit genes for Atu0393 from Agrobacterium fabrum C58

    ABC transporter, membrane spanning protein
    SEED: Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3)
    KEGG: multiple sugar transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3355 LysR family transcriptional regulator no 0.21
    2 Atu3253 ABC transporter substrate binding protein no 0.18
    3 Atu5111 conjugal transfer protein no 0.18
    4 Atu5172 type IV secretion protein AvhB11 no 0.18
    5 Atu3090 DNA polymerase III subunit epsilon no 0.17
    6 Atu3256 zinc-binding dehydrogenase no 0.17
    7 Atu1905 short chain dehydrogenase no 0.17
    8 Atu0823 ABC transporter, nucleotide binding/ATPase protein no 0.17
    9 Atu4445 ABC transporter permease no 0.17
    10 Atu1156 sulfate permease no 0.16
    11 Atu3228 DNA polymerase III subunit alpha no 0.16
    12 Atu2733 hypothetical protein no 0.16
    13 Atu2112 soluble lytic transglycosylase no 0.16
    14 Atu0820 ABC transporter, substrate binding protein (sulfate) no 0.16
    15 Atu4063 O-linked GlcNAc transferase no 0.16
    16 Atu3402 3-isopropylmalate dehydrogenase no 0.16
    17 Atu4683 hypothetical protein no 0.15
    18 Atu2177 hypothetical protein no 0.15
    19 Atu0902 hypothetical protein no 0.15
    20 Atu0230 hypothetical protein no 0.15

    Or look for negative cofitness