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  • Top cofit genes for Atu0222 from Agrobacterium fabrum C58

    components of type IV pilus
    SEED: Flp pilus assembly protein RcpC/CpaB
    KEGG: pilus assembly protein CpaB

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0221 component of type IV pilus 0.69 0.50
    2 Atu0233 lysozyme no 0.37
    3 Atu1793 phosphatidylcholine synthase no 0.36
    4 Atu3704 hypothetical protein no 0.35
    5 Atu0226 PilQ no 0.35
    6 Atu0215 hypothetical protein 0.59 0.34
    7 Atu2626 hypothetical protein no 0.32
    8 Atu0430 chaperonin (heat shock protein hsp33) no 0.32
    9 Atu2773 hypothetical protein 0.54 0.31
    10 Atu3608 hypothetical protein 0.38 0.31
    11 Atu2655 hypothetical protein no 0.31
    12 Atu1832 membrane protein associated metalloendopeptidase no 0.31
    13 Atu1300 MFS permease no 0.31
    14 Atu0360 apolipoprotein N-acyltransferase 0.57 0.31
    15 Atu2122 lytic murein transglycosylase no 0.30
    16 Atu2656 hypothetical protein no 0.30
    17 Atu1742 hypothetical protein 0.50 0.30
    18 Atu0359 hemolysin no 0.29
    19 Atu1658 conserved protein involved in phosphoglycerol modification of cyclic glucan no 0.29
    20 Atu1380 zinc metallopeptidase no 0.28

    Or look for negative cofitness