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  • Top cofit genes for Atu0221 from Agrobacterium fabrum C58

    component of type IV pilus
    SEED: Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
    KEGG: pilus assembly protein CpaC

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3704 hypothetical protein no 0.51
    2 Atu0215 hypothetical protein 0.81 0.51
    3 Atu0233 lysozyme no 0.50
    4 Atu0222 components of type IV pilus 0.69 0.50
    5 Atu2122 lytic murein transglycosylase no 0.49
    6 Atu1658 conserved protein involved in phosphoglycerol modification of cyclic glucan no 0.48
    7 Atu1742 hypothetical protein 0.52 0.47
    8 Atu2773 hypothetical protein 0.53 0.45
    9 Atu0226 PilQ no 0.43
    10 Atu0217 components of type IV pilus 0.79 0.42
    11 Atu0048 hypothetical protein no 0.41
    12 Atu2626 hypothetical protein no 0.41
    13 Atu0813 hypothetical protein no 0.40
    14 Atu3608 hypothetical protein 0.53 0.39
    15 Atu1832 membrane protein associated metalloendopeptidase 0.52 0.38
    16 Atu1380 zinc metallopeptidase no 0.38
    17 Atu2655 hypothetical protein no 0.37
    18 Atu2656 hypothetical protein no 0.37
    19 Atu2489 hypothetical protein 0.52 0.36
    20 Atu1793 phosphatidylcholine synthase no 0.35

    Or look for negative cofitness