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  • Top cofit genes for Atu0219 from Agrobacterium fabrum C58

    components of type IV pilus
    SEED: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
    KEGG: pilus assembly protein CpaE

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu3496 hypothetical protein no 0.38
    2 Atu0701 GGDEF family protein no 0.37
    3 Atu0215 hypothetical protein 0.76 0.35
    4 Atu3207 diguanylate cyclase 0.73 0.35
    5 Atu2773 hypothetical protein no 0.33
    6 Atu3495 diguanylate cyclase no 0.32
    7 Atu0221 component of type IV pilus 0.97 0.32
    8 Atu4490 diguanylate cyclase no 0.31
    9 Atu0218 component of type IV pilus 0.62 0.30
    10 Atu0217 components of type IV pilus 0.73 0.30
    11 Atu1983 hypothetical protein no 0.29
    12 Atu0524 transcriptional regulator, LuxR family no 0.29
    13 Atu0525 transcriptional regulator, LuxR family no 0.28
    14 Atu1446 two component response regulator no 0.27
    15 Atu2569 thiamine biosynthesis protein 0.25 0.27
    16 Atu8115 Hypothetical Protein no 0.26
    17 Atu0700 two component sensor kinase no 0.26
    18 Atu2747 hypothetical protein no 0.26
    19 Atu0332 RNA polymerase sigma-54 factor no 0.26
    20 Atu1686 peptidyl-prolyl cis-trans isomerse D no 0.26

    Or look for negative cofitness