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  • Top cofit genes for Atu0216 from Agrobacterium fabrum C58

    components of type IV pilus
    SEED: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
    KEGG: tight adherence protein C

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0226 PilQ no 0.39
    2 Atu0221 component of type IV pilus 0.79 0.34
    3 Atu0217 components of type IV pilus 0.88 0.34
    4 Atu4724 hypothetical protein no 0.30
    5 Atu0641 hypothetical protein no 0.29
    6 Atu1724 hypothetical protein no 0.29
    7 Atu3111 sugar ABC transporter ATPase no 0.29
    8 Atu3731 5-formyltetrahydrofolate cyclo-ligase no 0.28
    9 Atu2650 glycerol-3-phosphate dehydrogenase no 0.28
    10 Atu1114 GGDEF family protein no 0.28
    11 Atu2264 2-isopropylmalate synthase 0.57 0.28
    12 Atu2015 aminotransferase 0.71 0.28
    13 Atu2747 hypothetical protein no 0.27
    14 Atu2709 3-isopropylmalate dehydratase, large subunit no 0.27
    15 Atu3482 pantoate--beta-alanine ligase no 0.27
    16 Atu0432 O-succinylhomoserine sulfhydrylase no 0.27
    17 Atu3483 3-methyl-2-oxobutanoate hydroxymethyltransferase no 0.27
    18 Atu0099 prephenate dehydratase 0.81 0.27
    19 Atu2791 3-isopropylmalate dehydrogenase 0.55 0.27
    20 Atu0359 hemolysin no 0.27

    Or look for negative cofitness