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  • Top cofit genes for Atu0189 from Agrobacterium fabrum C58

    ABC transporter, membrane spanning protein (peptide)
    SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0190 ABC transporter, nucleotide binding/ATPase protein (peptide) 0.98 0.76
    2 Atu1774 ABC transporter, substrate binding protein (peptide) 0.81 0.73
    3 Atu0188 ABC transporter, membrane spanning protein (peptide) 0.98 0.62
    4 Atu0931 penicillin binding protein 0.46 0.43
    5 Atu0925 hypothetical protein no 0.43
    6 Atu3780 hypothetical protein no 0.42
    7 Atu3886 lysophospholipase no 0.42
    8 Atu0479 ABC transporter, substrate binding protein (amino acid) no 0.42
    9 Atu1056 hypothetical protein no 0.41
    10 Atu0926 hypothetical protein no 0.40
    11 Atu2489 hypothetical protein 0.41 0.37
    12 Atu3779 lytic murein transglycosylase 0.35 0.37
    13 Atu3628 hypothetical protein no 0.34
    14 Atu0806 hypothetical protein no 0.34
    15 Atu1793 phosphatidylcholine synthase no 0.34
    16 Atu3077 beta-lactamase 0.28 0.33
    17 Atu1300 MFS permease no 0.32
    18 Atu1803 cold shock protein no 0.32
    19 Atu3613 hypothetical protein no 0.32
    20 Atu0464 hypothetical protein no 0.31

    Or look for negative cofitness