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  • Top cofit genes for Atu0050 from Agrobacterium fabrum C58

    two component response regulator
    SEED: Dna binding response regulator PrrA (RegA)
    KEGG: two-component system, response regulator RegA

    Rank Hit Name Description Conserved? Cofitness  
    1 Atu0051 two component sensor kinase 0.90 0.90
    2 Atu1468 hypothetical protein 0.75 0.64
    3 Atu3744 ABC transporter permease 0.45 0.63
    4 Atu2073 membrane protein 0.79 0.62
    5 Atu0138 surfeit 1 0.77 0.62
    6 Atu1327 NADH-ubiquinone oxidoreductase no 0.60
    7 Atu0142 cytochrome o ubiquinol oxidase subunit II no 0.59
    8 Atu0978 two component response regulator no 0.57
    9 Atu8095 hypothetical protein no 0.56
    10 Atu2521 Protein regulated by acid pH no 0.54
    11 Atu0784 hypothetical protein no 0.54
    12 Atu0979 two component sensor kinase no 0.51
    13 Atu1364 ATP-dependent Clp protease, ATP-binding subunit 0.58 0.51
    14 Atu0141 cytochrome O ubiquinol oxidase subunit I 0.80 0.50
    15 Atu4433 oligopeptide ABC transporter permease no 0.49
    16 Atu2522 agrobacterium chromosomal virulence protein B no 0.48
    17 Atu4113 dipeptide ABC transporter substrate-binding protein no 0.48
    18 Atu1803 cold shock protein 0.40 0.48
    19 Atu3727 hypothetical protein 0.52 0.47
    20 Atu0780 hypothetical protein no 0.47

    Or look for negative cofitness