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  • Top cofit genes for AMB_RS16780 from Magnetospirillum magneticum AMB-1

    plasmid pRiA4b ORF-3 family protein
    SEED: TnpR protein

    Rank Hit Name Description Conserved? Cofitness  
    1 AMB_RS18025 helix-turn-helix domain-containing protein no 0.70
    2 AMB_RS07025 flagellar hook protein FlgE no 0.70
    3 AMB_RS06000 replication protein no 0.68
    4 AMB_RS05320 IS3 family transposase no 0.67
    5 AMB_RS19840 hypothetical protein no 0.67
    6 AMB_RS21660 hypothetical protein no 0.67
    7 AMB_RS13235 cytochrome c553 no 0.66
    8 AMB_RS03500 DNA-protecting protein DprA no 0.66
    9 AMB_RS05375 helix-turn-helix domain-containing protein no 0.66
    10 AMB_RS06580 DUF1007 domain-containing protein no 0.65
    11 AMB_RS24630 IS3 family transposase no 0.65
    12 AMB_RS18135 enoyl-CoA hydratase/isomerase family protein no 0.65
    13 AMB_RS11065 hypothetical protein no 0.65
    14 AMB_RS03655 hypothetical protein no 0.64
    15 AMB_RS05250 hypothetical protein no 0.64
    16 AMB_RS12375 response regulator no 0.64
    17 AMB_RS07775 phosphoribosylaminoimidazolesuccinocarboxamide synthase no 0.64
    18 AMB_RS16250 hypothetical protein no 0.63
    19 AMB_RS20995 carboxypeptidase regulatory-like domain-containing protein no 0.63
    20 AMB_RS03085 S-adenosylmethionine:tRNA ribosyltransferase-isomerase no 0.63

    Or look for negative cofitness