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  • Top cofit genes for AMB_RS13145 from Magnetospirillum magneticum AMB-1

    positive regulator of sigma E activity
    SEED: Sigma factor RpoE regulatory protein RseC
    KEGG: sigma-E factor negative regulatory protein RseC

    Rank Hit Name Description Conserved? Cofitness  
    1 AMB_RS05505 GDP-mannose 4,6-dehydratase no 0.86
    2 AMB_RS19325 NAD(P)/FAD-dependent oxidoreductase no 0.84
    3 AMB_RS13160 electron transport complex subunit RsxC no 0.83
    4 AMB_RS23095 class I SAM-dependent methyltransferase no 0.81
    5 AMB_RS07295 hypothetical protein no 0.81
    6 AMB_RS22580 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.80
    7 AMB_RS21385 helix-turn-helix transcriptional regulator no 0.80
    8 AMB_RS17365 acriflavine resistance protein B no 0.80
    9 AMB_RS05500 GDP-mannose 4,6 dehydratase no 0.80
    10 AMB_RS00435 B12-binding domain-containing radical SAM protein no 0.79
    11 AMB_RS00045 thioredoxin 0.52 0.79
    12 AMB_RS11360 membrane protein no 0.79
    13 AMB_RS00970 DUF1924 domain-containing protein no 0.79
    14 AMB_RS11820 transcriptional regulator NrdR no 0.79
    15 AMB_RS23205 glycosyl transferase no 0.78
    16 AMB_RS22575 GNAT family N-acetyltransferase no 0.78
    17 AMB_RS10290 DUF1819 domain-containing protein no 0.77
    18 AMB_RS18100 DUF2249 domain-containing protein no 0.77
    19 AMB_RS16930 hypothetical protein no 0.76
    20 AMB_RS12920 exo-beta-1,3-glucanase no 0.75

    Or look for negative cofitness