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  • Top cofit genes for AMB_RS08280 from Magnetospirillum magneticum AMB-1

    hydrogenase expression/formation protein HypE
    SEED: [NiFe] hydrogenase metallocenter assembly protein HypE
    KEGG: hydrogenase expression/formation protein HypE

    Rank Hit Name Description Conserved? Cofitness  
    1 AMB_RS08310 hydrogenase accessory protein HypB 0.43 0.75
    2 AMB_RS11745 Crp/Fnr family transcriptional regulator no 0.66
    3 AMB_RS14960 hypothetical protein no 0.66
    4 AMB_RS02500 hypothetical protein no 0.63
    5 AMB_RS22205 hypothetical protein no 0.63
    6 AMB_RS02835 two-component sensor histidine kinase no 0.62
    7 AMB_RS17805 HAMP domain-containing protein no 0.62
    8 AMB_RS20440 hypothetical protein no 0.61
    9 AMB_RS22450 electron transfer flavoprotein-ubiquinone oxidoreductase no 0.61
    10 AMB_RS03060 peptidoglycan editing factor PgeF 0.44 0.61
    11 AMB_RS04105 5-carboxymethyl-2-hydroxymuconate isomerase no 0.60
    12 AMB_RS04520 glycine zipper 2TM domain-containing protein no 0.60
    13 AMB_RS15415 glycogen/starch/alpha-glucan phosphorylase no 0.60
    14 AMB_RS02200 hypothetical protein no 0.60
    15 AMB_RS01655 hypothetical protein no 0.59
    16 AMB_RS06370 DNA-binding response regulator no 0.59
    17 AMB_RS16130 phosphoglycerate dehydrogenase no 0.59
    18 AMB_RS16080 tRNA-Glu no 0.59
    19 AMB_RS17625 hopanoid biosynthesis associated radical SAM protein HpnJ no 0.59
    20 AMB_RS16100 RNA polymerase sigma factor RpoH no 0.58

    Or look for negative cofitness