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  • Top cofit genes for AMB_RS08040 from Magnetospirillum magneticum AMB-1

    cold-shock protein
    SEED: Cold shock protein CspA
    KEGG: cold shock protein (beta-ribbon, CspA family)

    Rank Hit Name Description Conserved? Cofitness  
    1 AMB_RS11310 cyclic nucleotide-binding protein no 0.74
    2 AMB_RS00775 DUF2478 domain-containing protein no 0.74
    3 AMB_RS21810 tRNA glutamyl-Q(34) synthetase GluQRS 0.21 0.69
    4 AMB_RS15425 glycogen debranching enzyme GlgX no 0.69
    5 AMB_RS06015 hypothetical protein no 0.69
    6 AMB_RS12380 DsbA family oxidoreductase 0.58 0.67
    7 AMB_RS06490 tandem-95 repeat protein no 0.66
    8 AMB_RS11130 murein transglycosylase no 0.66
    9 AMB_RS13120 nitronate monooxygenase no 0.66
    10 AMB_RS14425 molybdopterin molybdenumtransferase MoeA 0.31 0.65
    11 AMB_RS09100 hypothetical protein no 0.65
    12 AMB_RS18400 hypothetical protein no 0.63
    13 AMB_RS17680 flagellar basal-body rod protein FlgG 0.65 0.63
    14 AMB_RS21175 hypothetical protein no 0.63
    15 AMB_RS03805 DUF420 domain-containing protein no 0.63
    16 AMB_RS11790 NnrS family protein no 0.63
    17 AMB_RS23250 hypothetical protein no 0.62
    18 AMB_RS12820 two-component sensor histidine kinase no 0.62
    19 AMB_RS11695 MgtC/SapB family protein no 0.61
    20 AMB_RS10920 hypothetical protein no 0.61

    Or look for negative cofitness