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  • Top cofit genes for AMB_RS04550 from Magnetospirillum magneticum AMB-1

    C4-dicarboxylate ABC transporter permease
    SEED: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
    KEGG: C4-dicarboxylate transporter, DctM subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 AMB_RS11505 helix-turn-helix domain-containing protein no 0.74
    2 AMB_RS24270 phage portal protein no 0.66
    3 AMB_RS14945 AEC family transporter no 0.63
    4 AMB_RS08355 hypothetical protein no 0.62
    5 AMB_RS03485 AEC family transporter no 0.59
    6 AMB_RS09825 ATPase no 0.59
    7 AMB_RS11695 MgtC/SapB family protein no 0.58
    8 AMB_RS11595 PAS domain S-box protein no 0.58
    9 AMB_RS06490 tandem-95 repeat protein no 0.57
    10 AMB_RS08495 hypothetical protein no 0.56
    11 AMB_RS17045 sulfurtransferase TusD no 0.56
    12 AMB_RS08605 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase no 0.55
    13 AMB_RS15615 PAS domain-containing protein no 0.55
    14 AMB_RS00605 hypothetical protein no 0.55
    15 AMB_RS18870 fructose-bisphosphatase class II no 0.55
    16 AMB_RS15910 hypothetical protein no 0.55
    17 AMB_RS01555 hypothetical protein no 0.54
    18 AMB_RS10905 indolepyruvate ferredoxin oxidoreductase no 0.54
    19 AMB_RS15625 phosphatase no 0.54
    20 AMB_RS04070 hypothetical protein no 0.54

    Or look for negative cofitness