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  • Top cofit genes for AMB_RS04465 from Magnetospirillum magneticum AMB-1

    ribonuclease R
    SEED: 3'-to-5' exoribonuclease RNase R
    KEGG: ribonuclease R

    Rank Hit Name Description Conserved? Cofitness  
    1 AMB_RS15640 methyltransferase domain-containing protein no 0.82
    2 AMB_RS18100 DUF2249 domain-containing protein no 0.82
    3 AMB_RS18545 PAS domain S-box protein no 0.81
    4 AMB_RS20880 FCD domain-containing protein no 0.81
    5 AMB_RS00045 thioredoxin 0.33 0.80
    6 AMB_RS07295 hypothetical protein no 0.80
    7 AMB_RS18010 sensor histidine kinase no 0.80
    8 AMB_RS19675 DNA-binding response regulator 0.69 0.79
    9 AMB_RS22575 GNAT family N-acetyltransferase no 0.79
    10 AMB_RS17555 Signal transduction histidine kinase regulating C4-dicarboxylate transport system no 0.79
    11 AMB_RS18910 Crp/Fnr family transcriptional regulator no 0.78
    12 AMB_RS09460 DNA-binding response regulator no 0.78
    13 AMB_RS07660 hypothetical protein no 0.77
    14 AMB_RS09295 carboxymuconolactone decarboxylase family protein no 0.77
    15 AMB_RS00175 hypothetical protein no 0.77
    16 AMB_RS12590 tetratricopeptide repeat protein no 0.76
    17 AMB_RS23095 class I SAM-dependent methyltransferase no 0.76
    18 AMB_RS12785 murein transglycosylase 0.48 0.76
    19 AMB_RS00250 dTDP-4-dehydrorhamnose 3,5-epimerase no 0.76
    20 AMB_RS24545 hypothetical protein no 0.76

    Or look for negative cofitness