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  • Top cofit genes for AMB_RS03890 from Magnetospirillum magneticum AMB-1

    GGDEF domain-containing protein
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    KEGG: diguanylate cyclase

    Rank Hit Name Description Conserved? Cofitness  
    1 AMB_RS16575 DNA polymerase III subunit epsilon no 0.73
    2 AMB_RS04850 hypothetical protein no 0.70
    3 AMB_RS17820 MFS transporter no 0.69
    4 AMB_RS01175 C4-dicarboxylate ABC transporter no 0.68
    5 AMB_RS12455 hypothetical protein no 0.67
    6 AMB_RS05660 Ni,Fe-hydrogenase I large subunit no 0.66
    7 AMB_RS14440 hypothetical protein no 0.66
    8 AMB_RS09350 SufS family cysteine desulfurase no 0.66
    9 AMB_RS18670 response regulator no 0.65
    10 AMB_RS21145 alpha/beta hydrolase no 0.65
    11 AMB_RS05215 methyl-accepting chemotaxis protein no 0.65
    12 AMB_RS19365 chemotactic signal-response protein cheL no 0.65
    13 AMB_RS14230 response regulator no 0.64
    14 AMB_RS10020 hypothetical protein no 0.64
    15 AMB_RS19880 site-specific tyrosine recombinase XerD no 0.63
    16 AMB_RS08605 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase no 0.63
    17 AMB_RS24000 glycosyltransferase family 1 protein no 0.62
    18 AMB_RS06230 5,6-dimethylbenzimidazole synthase no 0.62
    19 AMB_RS18175 branched-chain amino acid ABC transporter permease no 0.61
    20 AMB_RS07005 AsnC family transcriptional regulator no 0.61

    Or look for negative cofitness