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  • Top cofit genes for AMB_RS03500 from Magnetospirillum magneticum AMB-1

    DNA-protecting protein DprA
    SEED: Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake
    KEGG: DNA processing protein

    Rank Hit Name Description Conserved? Cofitness  
    1 AMB_RS05375 helix-turn-helix domain-containing protein no 0.79
    2 AMB_RS10505 hypothetical protein no 0.77
    3 AMB_RS11065 hypothetical protein no 0.74
    4 AMB_RS02210 DUF2786 domain-containing protein no 0.74
    5 AMB_RS03085 S-adenosylmethionine:tRNA ribosyltransferase-isomerase no 0.73
    6 AMB_RS17110 methyl-accepting chemotaxis protein no 0.73
    7 AMB_RS01575 arsenate reductase (glutaredoxin) 0.49 0.72
    8 AMB_RS04740 hypothetical protein no 0.71
    9 AMB_RS08675 hypothetical protein no 0.71
    10 AMB_RS21805 glutathione transferase GstA 0.15 0.71
    11 AMB_RS14025 tRNA-Val no 0.71
    12 AMB_RS07775 phosphoribosylaminoimidazolesuccinocarboxamide synthase no 0.70
    13 AMB_RS11560 chemotaxis sensory transducer no 0.70
    14 AMB_RS21515 hypothetical protein no 0.70
    15 AMB_RS16700 nuclease PIN no 0.70
    16 AMB_RS07025 flagellar hook protein FlgE no 0.70
    17 AMB_RS12935 hypothetical protein no 0.69
    18 AMB_RS04710 type II toxin-antitoxin system RelE/ParE family toxin no 0.69
    19 AMB_RS11080 site-specific DNA methylase no 0.68
    20 AMB_RS23970 HEAT repeat domain-containing protein no 0.68

    Or look for negative cofitness