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Cofit
Protein
Homologs
Top cofit genes for ABIE41_RS12440 from
Bosea sp. OAE506
YitT family protein
SEED: Transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABIE41
_RS05860
hypothetical protein
no
0.69
2
ABIE41
_RS23450
peptide ABC transporter permease
no
0.67
3
ABIE41
_RS06355
AprI/Inh family metalloprotease inhibitor
no
0.66
4
ABIE41
_RS15740
triose-phosphate isomerase
no
0.65
5
ABIE41
_RS03260
translation elongation factor 4
0.21
0.65
6
ABIE41
_RS21465
c-type cytochrome biogenesis protein CcmI
0.24
0.64
7
ABIE41
_RS06065
glucan ABC transporter ATP-binding protein/ permease
no
0.63
8
ABIE41
_RS03540
Rrf2 family transcriptional regulator
no
0.63
9
ABIE41
_RS22400
PBP1A family penicillin-binding protein
no
0.62
10
ABIE41
_RS21195
TRAP transporter substrate-binding protein
no
0.62
11
ABIE41
_RS04995
DsbE family thiol:disulfide interchange protein
no
0.62
12
ABIE41
_RS23280
TIGR01459 family HAD-type hydrolase
0.41
0.62
13
ABIE41
_RS09460
YebC/PmpR family DNA-binding transcriptional regulator
no
0.61
14
ABIE41
_RS11420
molybdopterin converting factor subunit 1
no
0.61
15
ABIE41
_RS20135
SDR family oxidoreductase
no
0.60
16
ABIE41
_RS13025
TRAP transporter large permease subunit
no
0.60
17
ABIE41
_RS06980
HWE histidine kinase domain-containing protein
no
0.60
18
ABIE41
_RS00075
lysine-2,3-aminomutase-like protein
no
0.59
19
ABIE41
_RS24065
quinone-dependent dihydroorotate dehydrogenase
no
0.59
20
ABIE41
_RS04485
GNAT family N-acetyltransferase
no
0.59
Or look for
negative cofitness