Top cofit genes for ABIE40_RS28460 from Rhizobium sp. OAE497

DNA ligase D
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
KEGG: DNA ligase (ATP)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	ABIE40_RS09590		DEAD/DEAH box helicase	no	0.57
2	ABIE40_RS07395		GNAT family N-acetyltransferase	no	0.56
3	ABIE40_RS27580		ProQ/FINO family protein	no	0.56
4	ABIE40_RS07590		hypothetical protein	no	0.56
5	ABIE40_RS15465		CHASE3 domain-containing protein	no	0.56
6	ABIE40_RS29870		transporter substrate-binding domain-containing protein	no	0.55
7	ABIE40_RS25540		CmpA/NrtA family ABC transporter substrate-binding protein	no	0.55
8	ABIE40_RS28305		TetR/AcrR family transcriptional regulator	no	0.54
9	ABIE40_RS03285		AsmA family protein	no	0.54
10	ABIE40_RS26885		hypothetical protein	no	0.54
11	ABIE40_RS28750		chemotaxis protein CheA	no	0.53
12	ABIE40_RS27760		helix-turn-helix transcriptional regulator	no	0.53
13	ABIE40_RS22840		sterol desaturase family protein	no	0.52
14	ABIE40_RS30830		cytochrome c oxidase subunit I	no	0.52
15	ABIE40_RS09690		hypothetical protein	no	0.52
16	ABIE40_RS04845		S9 family peptidase	no	0.52
17	ABIE40_RS15265		carbohydrate ABC transporter permease	no	0.52
18	ABIE40_RS27435		histidine kinase dimerization/phosphoacceptor domain -containing protein	no	0.52
19	ABIE40_RS15280		alpha-L-rhamnosidase	no	0.51
20	ABIE40_RS06530		NUDIX domain-containing protein	no	0.51

Or look for negative cofitness