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  • Top cofit genes for ABID97_RS29215 from Variovorax sp. OAS795

    LysR family transcriptional regulator
    SEED: Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS24145 RNA repair transcriptional activator RtcR no 0.28
    2 ABID97_RS21160 TAXI family TRAP transporter solute-binding subunit 0.56 0.27
    3 ABID97_RS17005 3-hydroxyacyl-CoA dehydrogenase no 0.25
    4 ABID97_RS00290 glutathione S-transferase no 0.24
    5 ABID97_RS01985 OmpA family protein no 0.24
    6 ABID97_RS09340 branched-chain amino acid ABC transporter permease 0.22 0.24
    7 ABID97_RS15595 mobilization protein no 0.24
    8 ABID97_RS07925 SDR family NAD(P)-dependent oxidoreductase no 0.24
    9 ABID97_RS09320 aspartate aminotransferase family protein no 0.24
    10 ABID97_RS17460 phenylacetaldoxime dehydratase family protein no 0.24
    11 ABID97_RS13620 carbamoyltransferase HypF no 0.23
    12 ABID97_RS19305 glutathione S-transferase family protein no 0.23
    13 ABID97_RS10170 efflux transporter outer membrane subunit no 0.23
    14 ABID97_RS13245 XRE family transcriptional regulator no 0.23
    15 ABID97_RS06810 DUF2235 domain-containing protein no 0.23
    16 ABID97_RS24105 RNA 3'-terminal phosphate cyclase no 0.23
    17 ABID97_RS00415 hypothetical protein no 0.23
    18 ABID97_RS21910 hypothetical protein no 0.23
    19 ABID97_RS13450 TetR/AcrR family transcriptional regulator no 0.23
    20 ABID97_RS04525 biopolymer transporter ExbD no 0.23

    Or look for negative cofitness