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  • Top cofit genes for ABID97_RS29040 from Variovorax sp. OAS795

    IclR family transcriptional regulator
    SEED: Transcriptional regulator, IclR family

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS08025 nuclear transport factor 2 family protein no 0.53
    2 ABID97_RS16780 polysaccharide deacetylase family protein no 0.48
    3 ABID97_RS17355 efflux RND transporter periplasmic adaptor subunit no 0.44
    4 ABID97_RS08670 YciI family protein no 0.43
    5 ABID97_RS21120 amino acid ABC transporter ATP-binding protein no 0.43
    6 ABID97_RS04130 DEAD/DEAH box helicase no 0.39
    7 ABID97_RS23530 urease subunit alpha no 0.38
    8 ABID97_RS26835 DUF1629 domain-containing protein no 0.38
    9 ABID97_RS02560 MFS transporter no 0.38
    10 ABID97_RS07365 response regulator no 0.38
    11 ABID97_RS19620 NAD-dependent epimerase no 0.37
    12 ABID97_RS21375 TolC family outer membrane protein no 0.37
    13 ABID97_RS02075 DUF3717 domain-containing protein no 0.37
    14 ABID97_RS02545 16S rRNA (uracil(1498)-N(3))-methyltransferase no 0.37
    15 ABID97_RS28570 FAD-binding oxidoreductase no 0.36
    16 ABID97_RS14760 SDR family oxidoreductase no 0.36
    17 ABID97_RS06155 class I SAM-dependent methyltransferase no 0.36
    18 ABID97_RS14490 hypothetical protein no 0.36
    19 ABID97_RS04645 MFS transporter no 0.36
    20 ABID97_RS02370 LysR family transcriptional regulator no 0.36

    Or look for negative cofitness