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  • Top cofit genes for ABID97_RS28215 from Variovorax sp. OAS795

    tripartite tricarboxylate transporter substrate binding protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS03255 3-keto-5-aminohexanoate cleavage protein no 0.38
    2 ABID97_RS17685 ABC transporter ATP-binding protein no 0.33
    3 ABID97_RS17905 type IV pilin protein no 0.33
    4 ABID97_RS18770 FAD-dependent oxidoreductase no 0.32
    5 ABID97_RS07940 acyl-CoA dehydrogenase family protein no 0.32
    6 ABID97_RS17665 DUF1993 domain-containing protein no 0.31
    7 ABID97_RS26425 ABC transporter ATP-binding protein no 0.30
    8 ABID97_RS06035 UdgX family uracil-DNA binding protein no 0.30
    9 ABID97_RS05220 hypothetical protein no 0.29
    10 ABID97_RS13105 quinone oxidoreductase no 0.29
    11 ABID97_RS04315 branched-chain amino acid ABC transporter permease no 0.29
    12 ABID97_RS19460 hydroxymethylglutaryl-CoA lyase no 0.29
    13 ABID97_RS12745 MxaK protein no 0.29
    14 ABID97_RS22775 hydroxyphenylacetyl-CoA thioesterase PaaI no 0.28
    15 ABID97_RS17995 pirin family protein no 0.28
    16 ABID97_RS11355 acyl-CoA dehydrogenase family protein no 0.28
    17 ABID97_RS25675 beta-1,6-N-acetylglucosaminyltransferase no 0.27
    18 ABID97_RS04940 CHAT domain-containing protein no 0.27
    19 ABID97_RS18970 cytochrome P450 no 0.27
    20 ABID97_RS23885 pitrilysin family protein no 0.27

    Or look for negative cofitness