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  • Top cofit genes for ABID97_RS27800 from Variovorax sp. OAS795

    branched-chain amino acid ABC transporter permease
    SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS08670 YciI family protein no 0.36
    2 ABID97_RS11505 branched-chain amino acid ABC transporter permease no 0.32
    3 ABID97_RS25000 hypothetical protein no 0.32
    4 ABID97_RS03235 amidohydrolase no 0.31
    5 ABID97_RS27995 VOC family protein no 0.30
    6 ABID97_RS24615 PHB depolymerase family esterase no 0.30
    7 ABID97_RS22400 nucleoside deaminase no 0.28
    8 ABID97_RS11540 branched-chain amino acid ABC transporter permease no 0.28
    9 ABID97_RS13535 aldehyde dehydrogenase no 0.28
    10 ABID97_RS08275 SAM-dependent methyltransferase no 0.27
    11 ABID97_RS06765 GNAT family N-acetyltransferase no 0.27
    12 ABID97_RS11995 SIR2 family protein no 0.26
    13 ABID97_RS12530 HlyD family type I secretion periplasmic adaptor subunit no 0.26
    14 ABID97_RS15290 hypothetical protein no 0.26
    15 ABID97_RS08085 GNAT family N-acetyltransferase no 0.26
    16 ABID97_RS18690 hypothetical protein no 0.26
    17 ABID97_RS18090 2OG-Fe(II) oxygenase no 0.25
    18 ABID97_RS05525 hypothetical protein no 0.24
    19 ABID97_RS18445 helix-turn-helix transcriptional regulator no 0.24
    20 ABID97_RS27525 PadR family transcriptional regulator no 0.24

    Or look for negative cofitness