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  • Top cofit genes for ABID97_RS20265 from Variovorax sp. OAS795

    site-specific tyrosine recombinase XerD
    SEED: Tyrosine recombinase XerD
    KEGG: integrase/recombinase XerD

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS06150 tyrosine recombinase XerC 0.91 0.68
    2 ABID97_RS08425 tryptophan synthase subunit alpha 0.30 0.54
    3 ABID97_RS02275 recombinase RecA 0.85 0.52
    4 ABID97_RS06160 GTP-binding protein no 0.48
    5 ABID97_RS25405 16S ribosomal RNA no 0.48
    6 ABID97_RS14160 cell division protein ZapE 0.79 0.46
    7 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase 0.80 0.46
    8 ABID97_RS06275 crossover junction endodeoxyribonuclease RuvC 0.86 0.46
    9 ABID97_RS06575 trehalose-phosphatase 0.47 0.46
    10 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.85 0.45
    11 ABID97_RS17895 transcriptional regulator NrdR 0.78 0.45
    12 ABID97_RS07500 iron-sulfur cluster carrier protein ApbC 0.79 0.44
    13 ABID97_RS03910 orotate phosphoribosyltransferase 0.72 0.44
    14 ABID97_RS10720 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.81 0.43
    15 ABID97_RS08440 tRNA pseudouridine(38-40) synthase TruA 0.53 0.43
    16 ABID97_RS07885 NUDIX domain-containing protein 0.43 0.43
    17 ABID97_RS23455 hypothetical protein no 0.43
    18 ABID97_RS05260 aminodeoxychorismate/anthranilate synthase component II 0.36 0.42
    19 ABID97_RS16535 arginine/lysine/ornithine decarboxylase 0.25 0.42
    20 ABID97_RS05755 glycosyltransferase no 0.41

    Or look for negative cofitness