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Cofit
Top cofit genes for ABID97_RS18760 from
Variovorax sp. OAS795
3-isopropylmalate dehydratase small subunit
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABID97
_RS17860
peptidylprolyl isomerase
no
0.41
2
ABID97
_RS23055
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
no
0.40
3
ABID97
_RS19110
hypothetical protein
no
0.40
4
ABID97
_RS06490
efflux RND transporter permease subunit
no
0.40
5
ABID97
_RS04130
DEAD/DEAH box helicase
no
0.39
6
ABID97
_RS03485
GtrA family protein
no
0.39
7
ABID97
_RS15185
GPW/gp25 family protein
no
0.39
8
ABID97
_RS05480
EAL domain-containing protein
no
0.38
9
ABID97
_RS23050
large conductance mechanosensitive channel protein MscL
no
0.38
10
ABID97
_RS05475
TRAP transporter substrate-binding protein
no
0.37
11
ABID97
_RS13680
nickel-dependent hydrogenase large subunit
no
0.37
12
ABID97
_RS22995
YjbF family lipoprotein
no
0.37
13
ABID97
_RS03905
exodeoxyribonuclease III
no
0.36
14
ABID97
_RS22605
L-threonylcarbamoyladenylate synthase
no
0.36
15
ABID97
_RS00775
ABC transporter ATP-binding protein
no
0.36
16
ABID97
_RS10930
ATP-dependent chaperone ClpB
no
0.36
17
ABID97
_RS07610
response regulator transcription factor
no
0.36
18
ABID97
_RS19120
polysaccharide biosynthesis tyrosine autokinase
no
0.35
19
ABID97
_RS20720
Cd(II)/Pb(II)-responsive transcriptional regulator
no
0.35
20
ABID97
_RS19170
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
no
0.35
Or look for
negative cofitness