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  • Top cofit genes for ABID97_RS17680 from Variovorax sp. OAS795

    branched-chain amino acid ABC transporter permease
    SEED: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS06305 TonB family protein no 0.41
    2 ABID97_RS19790 hypothetical protein no 0.39
    3 ABID97_RS02225 FHA domain-containing protein no 0.39
    4 ABID97_RS20350 FtsX-like permease family protein no 0.39
    5 ABID97_RS16950 MotA/TolQ/ExbB proton channel family protein no 0.39
    6 ABID97_RS16665 S24 family peptidase no 0.38
    7 ABID97_RS19795 hypothetical protein no 0.37
    8 ABID97_RS24695 chemotaxis protein CheW no 0.37
    9 ABID97_RS29325 ATP-binding cassette domain-containing protein no 0.36
    10 ABID97_RS19130 GDP-L-fucose synthase no 0.36
    11 ABID97_RS19120 polysaccharide biosynthesis tyrosine autokinase no 0.36
    12 ABID97_RS21360 TetR/AcrR family transcriptional regulator no 0.35
    13 ABID97_RS16500 YbfB/YjiJ family MFS transporter 0.20 0.35
    14 ABID97_RS24700 response regulator 0.19 0.35
    15 ABID97_RS04000 MlaD family protein no 0.35
    16 ABID97_RS22605 L-threonylcarbamoyladenylate synthase no 0.35
    17 ABID97_RS17215 YkvA family protein no 0.35
    18 ABID97_RS04555 alpha-amylase family glycosyl hydrolase no 0.34
    19 ABID97_RS03475 hypothetical protein no 0.34
    20 ABID97_RS15840 aminotransferase class V-fold PLP-dependent enzyme no 0.34

    Or look for negative cofitness