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Cofit
Protein
Homologs
Top cofit genes for ABID97_RS17225 from
Variovorax sp. OAS795
polyhydroxyalkanoate synthesis repressor PhaR
SEED: PhbF
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABID97
_RS10565
phasin family protein
0.70
0.66
2
ABID97
_RS14950
IclR family transcriptional regulator C-terminal domain-containing protein
no
0.63
3
ABID97
_RS00730
DUF4148 domain-containing protein
no
0.51
4
ABID97
_RS28515
IclR family transcriptional regulator
no
0.51
5
ABID97
_RS14625
phosphate regulon sensor histidine kinase PhoR
0.84
0.51
6
ABID97
_RS24195
3-oxoacid CoA-transferase subunit B
no
0.51
7
ABID97
_RS13985
polyhydroxyalkanoate depolymerase
0.85
0.50
8
ABID97
_RS24380
protocatechuate 3,4-dioxygenase subunit beta
no
0.50
9
ABID97
_RS20740
FUSC family membrane protein
no
0.50
10
ABID97
_RS24375
LysR substrate-binding domain-containing protein
0.42
0.50
11
ABID97
_RS19950
ABC transporter ATP-binding protein
no
0.50
12
ABID97
_RS04610
potassium transporter Kup
no
0.49
13
ABID97
_RS14945
4-hydroxybenzoate 3-monooxygenase
no
0.49
14
ABID97
_RS19705
carboxymuconolactone decarboxylase family protein
no
0.49
15
ABID97
_RS08770
histidinol-phosphate transaminase
no
0.49
16
ABID97
_RS19925
ABC transporter substrate-binding protein
no
0.48
17
ABID97
_RS24385
protocatechuate 3,4-dioxygenase subunit alpha
0.31
0.46
18
ABID97
_RS23710
RNase adapter RapZ
0.40
0.46
19
ABID97
_RS14285
phosphoribosyltransferase
no
0.46
20
ABID97
_RS04630
glutathione synthase
0.87
0.45
Or look for
negative cofitness