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  • Top cofit genes for ABID97_RS16640 from Variovorax sp. OAS795

    PilT/PilU family type 4a pilus ATPase
    SEED: Twitching motility protein PilT
    KEGG: twitching motility protein PilU

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS17200 ribonuclease R no 0.61
    2 ABID97_RS22030 DEAD/DEAH box helicase no 0.58
    3 ABID97_RS08445 FimV/HubP family polar landmark protein no 0.58
    4 ABID97_RS26865 FAD-dependent tricarballylate dehydrogenase TcuA no 0.56
    5 ABID97_RS23655 YicC/YloC family endoribonuclease no 0.55
    6 ABID97_RS17595 ATP-dependent Clp protease ATP-binding subunit ClpX no 0.54
    7 ABID97_RS02150 class I SAM-dependent methyltransferase no 0.54
    8 ABID97_RS24690 methyl-accepting chemotaxis protein no 0.54
    9 ABID97_RS24355 Mur ligase family protein no 0.54
    10 ABID97_RS23425 tRNA-Pro no 0.54
    11 ABID97_RS14210 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN no 0.54
    12 ABID97_RS14380 tripartite tricarboxylate transporter substrate binding protein no 0.53
    13 ABID97_RS23440 A24 family peptidase no 0.53
    14 ABID97_RS18205 XRE family transcriptional regulator no 0.53
    15 ABID97_RS02140 sugar transferase no 0.52
    16 ABID97_RS02145 DegT/DnrJ/EryC1/StrS family aminotransferase no 0.52
    17 ABID97_RS08435 phosphoribosylanthranilate isomerase no 0.52
    18 ABID97_RS02120 PilX N-terminal domain-containing pilus assembly protein no 0.52
    19 ABID97_RS06480 hypothetical protein no 0.52
    20 ABID97_RS02200 nucleoside-diphosphate sugar epimerase/dehydratase no 0.52

    Or look for negative cofitness