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  • Top cofit genes for ABID97_RS15890 from Variovorax sp. OAS795

    PqiC family protein
    SEED: ortholog of Bordetella pertussis (BX470248) BP2750
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS18555 NAD(P)H-dependent oxidoreductase no 0.30
    2 ABID97_RS26730 TetR family transcriptional regulator C-terminal domain-containing protein no 0.28
    3 ABID97_RS13065 helix-turn-helix domain-containing protein no 0.27
    4 ABID97_RS03265 dioxygenase no 0.27
    5 ABID97_RS16340 ankyrin repeat domain-containing protein no 0.26
    6 ABID97_RS23195 ABC transporter substrate-binding protein no 0.26
    7 ABID97_RS24230 DegT/DnrJ/EryC1/StrS family aminotransferase no 0.26
    8 ABID97_RS04055 ABC transporter ATP-binding protein no 0.26
    9 ABID97_RS23200 VacJ family lipoprotein no 0.26
    10 ABID97_RS18770 FAD-dependent oxidoreductase no 0.26
    11 ABID97_RS06055 protease HtpX no 0.25
    12 ABID97_RS00330 efflux transporter outer membrane subunit no 0.25
    13 ABID97_RS00325 efflux RND transporter permease subunit no 0.25
    14 ABID97_RS10955 branched-chain amino acid ABC transporter permease no 0.25
    15 ABID97_RS23205 outer membrane lipid asymmetry maintenance protein MlaD no 0.25
    16 ABID97_RS27830 AMP-binding protein no 0.25
    17 ABID97_RS12885 transketolase no 0.25
    18 ABID97_RS18615 acetyl-CoA acetyltransferase no 0.25
    19 ABID97_RS13715 DNA cytosine methyltransferase no 0.24
    20 ABID97_RS19115 polysaccharide biosynthesis/export family protein no 0.24

    Or look for negative cofitness