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  • Top cofit genes for ABID97_RS14965 from Variovorax sp. OAS795

    DegQ family serine endoprotease
    SEED: Outer membrane stress sensor protease DegS
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS14955 response regulator 0.54 0.87
    2 ABID97_RS09905 YncE family protein 0.33 0.80
    3 ABID97_RS21925 heme-binding beta-barrel domain-containing protein no 0.76
    4 ABID97_RS09915 sterol desaturase family protein 0.87 0.72
    5 ABID97_RS09910 polysaccharide deacetylase family protein 0.34 0.72
    6 ABID97_RS07390 rhodanese-like domain-containing protein 0.34 0.65
    7 ABID97_RS25565 NADP-dependent oxidoreductase no 0.55
    8 ABID97_RS02855 sensor histidine kinase N-terminal domain-containing protein no 0.55
    9 ABID97_RS25570 alkene reductase no 0.53
    10 ABID97_RS02850 response regulator transcription factor no 0.51
    11 ABID97_RS27785 TetR/AcrR family transcriptional regulator 0.38 0.49
    12 ABID97_RS23290 penicillin-binding protein 1A no 0.48
    13 ABID97_RS08265 S49 family peptidase no 0.47
    14 ABID97_RS19540 phosphoethanolamine--lipid A transferase no 0.47
    15 ABID97_RS08330 RNA polymerase sigma factor RpoE 0.47 0.46
    16 ABID97_RS20390 DHA2 family efflux MFS transporter permease subunit no 0.46
    17 ABID97_RS25275 metallophosphoesterase no 0.43
    18 ABID97_RS06515 SDR family oxidoreductase 0.33 0.42
    19 ABID97_RS00315 TetR family transcriptional regulator 0.75 0.41
    20 ABID97_RS20395 efflux RND transporter periplasmic adaptor subunit no 0.41

    Or look for negative cofitness