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  • Top cofit genes for ABID97_RS12735 from Variovorax sp. OAS795

    pyrroloquinoline quinone biosynthesis protein PqqE
    SEED: Coenzyme PQQ synthesis protein E
    KEGG: pyrroloquinoline quinone biosynthesis protein E

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS07095 transaldolase 0.74 0.36
    2 ABID97_RS00800 alpha/beta hydrolase 0.23 0.34
    3 ABID97_RS14200 pseudouridine synthase no 0.34
    4 ABID97_RS16820 DUF1109 domain-containing protein no 0.31
    5 ABID97_RS06360 hypothetical protein no 0.30
    6 ABID97_RS06195 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH no 0.30
    7 ABID97_RS03115 2,3-epoxybenzoyl-CoA dihydrolase no 0.30
    8 ABID97_RS07315 DMT family transporter no 0.29
    9 ABID97_RS06495 histidine phosphatase family protein no 0.29
    10 ABID97_RS28910 phage integrase family protein no 0.28
    11 ABID97_RS08825 indolepyruvate ferredoxin oxidoreductase subunit alpha no 0.27
    12 ABID97_RS04805 ATP-binding protein no 0.27
    13 ABID97_RS16160 fatty acid desaturase no 0.27
    14 ABID97_RS24205 IclR family transcriptional regulator C-terminal domain-containing protein no 0.27
    15 ABID97_RS13965 Lrp/AsnC family transcriptional regulator no 0.27
    16 ABID97_RS21475 amino acid adenylation domain-containing protein no 0.27
    17 ABID97_RS13535 aldehyde dehydrogenase no 0.27
    18 ABID97_RS17665 DUF1993 domain-containing protein no 0.27
    19 ABID97_RS03125 benzoyl-CoA 2,3-epoxidase subunit BoxA no 0.26
    20 ABID97_RS06385 zinc-ribbon and DUF3426 domain-containing protein no 0.26

    Or look for negative cofitness