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  • Top cofit genes for ABID97_RS12700 from Variovorax sp. OAS795

    response regulator transcription factor
    KEGG: two-component system, NarL family, invasion response regulator UvrY

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS08825 indolepyruvate ferredoxin oxidoreductase subunit alpha no 0.38
    2 ABID97_RS08625 S9 family peptidase no 0.37
    3 ABID97_RS16430 type II toxin-antitoxin system RatA family toxin no 0.36
    4 ABID97_RS28115 ATP-binding protein no 0.34
    5 ABID97_RS08585 SMI1/KNR4 family protein no 0.32
    6 ABID97_RS17860 peptidylprolyl isomerase 0.19 0.32
    7 ABID97_RS23860 RsmD family RNA methyltransferase no 0.32
    8 ABID97_RS04975 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein no 0.32
    9 ABID97_RS15870 MFS transporter no 0.31
    10 ABID97_RS22690 LysR family transcriptional regulator no 0.31
    11 ABID97_RS16455 ATP-binding protein no 0.31
    12 ABID97_RS28435 OB-fold domain-containing protein no 0.30
    13 ABID97_RS24015 crotonase/enoyl-CoA hydratase family protein no 0.30
    14 ABID97_RS03780 glycerate kinase no 0.30
    15 ABID97_RS05480 EAL domain-containing protein no 0.30
    16 ABID97_RS00170 arginase no 0.30
    17 ABID97_RS18000 flavodoxin family protein no 0.30
    18 ABID97_RS05475 TRAP transporter substrate-binding protein no 0.30
    19 ABID97_RS03905 exodeoxyribonuclease III 0.33 0.29
    20 ABID97_RS21460 lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein no 0.29

    Or look for negative cofitness