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Cofit
Protein
Homologs
Top cofit genes for ABID97_RS11170 from
Variovorax sp. OAS795
GntR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABID97
_RS22760
TetR/AcrR family transcriptional regulator
no
0.62
2
ABID97
_RS08765
CobD/CbiB family protein
no
0.61
3
ABID97
_RS06335
metalloprotease TldD
no
0.58
4
ABID97
_RS24055
TetR/AcrR family transcriptional regulator
no
0.57
5
ABID97
_RS20350
FtsX-like permease family protein
no
0.55
6
ABID97
_RS16920
NADP-dependent isocitrate dehydrogenase
0.29
0.54
7
ABID97
_RS13705
hypothetical protein
no
0.53
8
ABID97
_RS13450
TetR/AcrR family transcriptional regulator
no
0.53
9
ABID97
_RS19065
GntR family transcriptional regulator
no
0.53
10
ABID97
_RS03270
LacI family DNA-binding transcriptional regulator
no
0.53
11
ABID97
_RS03980
IclR family transcriptional regulator
no
0.52
12
ABID97
_RS14080
M3 family metallopeptidase
no
0.51
13
ABID97
_RS03435
imidazolonepropionase
no
0.50
14
ABID97
_RS08240
heme biosynthesis HemY N-terminal domain-containing protein
no
0.50
15
ABID97
_RS06355
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
0.30
0.49
16
ABID97
_RS20695
metalloprotease PmbA
no
0.49
17
ABID97
_RS16910
ATP-dependent Clp protease ATP-binding subunit ClpA
0.35
0.49
18
ABID97
_RS05705
GDP-mannose 4,6-dehydratase
no
0.49
19
ABID97
_RS16915
ATP-dependent Clp protease adapter ClpS
0.31
0.48
20
ABID97
_RS03110
helix-turn-helix transcriptional regulator
no
0.48
Or look for
negative cofitness