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  • Top cofit genes for ABID97_RS09990 from Variovorax sp. OAS795

    LysR family transcriptional regulator
    SEED: Galactose-binding protein regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS21210 2-dehydro-3-deoxygalactonokinase no 0.37
    2 ABID97_RS08725 inorganic phosphate transporter no 0.36
    3 ABID97_RS05070 type VI secretion system tip protein TssI/VgrG no 0.29
    4 ABID97_RS19345 AAA family ATPase no 0.28
    5 ABID97_RS28815 MBL fold metallo-hydrolase no 0.28
    6 ABID97_RS12745 MxaK protein no 0.28
    7 ABID97_RS10020 lysylphosphatidylglycerol synthase domain-containing protein no 0.28
    8 ABID97_RS12280 c-type cytochrome no 0.28
    9 ABID97_RS19325 DUF2894 domain-containing protein no 0.27
    10 ABID97_RS28825 3-hydroxyacyl-CoA dehydrogenase no 0.27
    11 ABID97_RS02540 phosphotransferase no 0.27
    12 ABID97_RS27425 tannase/feruloyl esterase family alpha/beta hydrolase no 0.27
    13 ABID97_RS11360 acyl-CoA dehydrogenase family protein no 0.27
    14 ABID97_RS04060 IclR family transcriptional regulator no 0.27
    15 ABID97_RS21215 2-dehydro-3-deoxy-6-phosphogalactonate aldolase no 0.26
    16 ABID97_RS16410 type II toxin-antitoxin system Phd/YefM family antitoxin no 0.26
    17 ABID97_RS08675 RNA polymerase sigma factor no 0.25
    18 ABID97_RS16405 type II toxin-antitoxin system VapC family toxin no 0.25
    19 ABID97_RS21300 phosphogluconate dehydratase no 0.25
    20 ABID97_RS02730 endonuclease/exonuclease/phosphatase family protein no 0.25

    Or look for negative cofitness