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  • Top cofit genes for ABID97_RS07670 from Variovorax sp. OAS795

    amino acid ABC transporter permease
    SEED: Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4)
    KEGG: putative glutamine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS21375 TolC family outer membrane protein no 0.51
    2 ABID97_RS04120 DUF3820 family protein no 0.50
    3 ABID97_RS04130 DEAD/DEAH box helicase no 0.50
    4 ABID97_RS05475 TRAP transporter substrate-binding protein no 0.49
    5 ABID97_RS03485 GtrA family protein no 0.48
    6 ABID97_RS02615 SDR family oxidoreductase 0.33 0.48
    7 ABID97_RS04010 ABC transporter permease 0.32 0.48
    8 ABID97_RS04110 tripartite tricarboxylate transporter TctB family protein no 0.48
    9 ABID97_RS01770 VOC family protein no 0.48
    10 ABID97_RS06490 efflux RND transporter permease subunit no 0.47
    11 ABID97_RS14760 SDR family oxidoreductase no 0.47
    12 ABID97_RS14980 hypothetical protein no 0.47
    13 ABID97_RS22090 BMP family ABC transporter substrate-binding protein 0.20 0.46
    14 ABID97_RS05480 EAL domain-containing protein no 0.46
    15 ABID97_RS23055 4-hydroxythreonine-4-phosphate dehydrogenase PdxA no 0.46
    16 ABID97_RS23010 hypothetical protein no 0.46
    17 ABID97_RS22605 L-threonylcarbamoyladenylate synthase no 0.45
    18 ABID97_RS03475 hypothetical protein no 0.45
    19 ABID97_RS04105 tripartite tricarboxylate transporter permease no 0.45
    20 ABID97_RS17215 YkvA family protein no 0.44

    Or look for negative cofitness