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  • Top cofit genes for ABID97_RS06320 from Variovorax sp. OAS795

    response regulator transcription factor
    SEED: response regulator, NarL-family

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS08765 CobD/CbiB family protein no 0.56
    2 ABID97_RS06305 TonB family protein no 0.55
    3 ABID97_RS02230 Stp1/IreP family PP2C-type Ser/Thr phosphatase no 0.52
    4 ABID97_RS15840 aminotransferase class V-fold PLP-dependent enzyme no 0.52
    5 ABID97_RS16665 S24 family peptidase no 0.50
    6 ABID97_RS00300 helix-turn-helix transcriptional regulator no 0.48
    7 ABID97_RS16950 MotA/TolQ/ExbB proton channel family protein no 0.48
    8 ABID97_RS07865 CDP-6-deoxy-delta-3,4-glucoseen reductase 0.30 0.46
    9 ABID97_RS15680 peptidylprolyl isomerase no 0.46
    10 ABID97_RS05850 TetR/AcrR family transcriptional regulator no 0.45
    11 ABID97_RS22985 ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.45
    12 ABID97_RS19080 class I SAM-dependent methyltransferase no 0.45
    13 ABID97_RS19790 hypothetical protein no 0.45
    14 ABID97_RS17215 YkvA family protein no 0.44
    15 ABID97_RS21360 TetR/AcrR family transcriptional regulator no 0.43
    16 ABID97_RS19800 MFS transporter no 0.43
    17 ABID97_RS17360 alpha/beta hydrolase no 0.43
    18 ABID97_RS09265 aromatic ring-hydroxylating dioxygenase subunit alpha no 0.42
    19 ABID97_RS20005 transglutaminase family protein no 0.42
    20 ABID97_RS23010 hypothetical protein no 0.42

    Or look for negative cofitness