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  • Top cofit genes for ABID97_RS06155 from Variovorax sp. OAS795

    class I SAM-dependent methyltransferase
    SEED: LSU m5C1962 methyltransferase RlmI
    KEGG: ribosomal RNA large subunit methyltransferase I

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS01110 citrate/2-methylcitrate synthase no 0.61
    2 ABID97_RS06100 tripartite tricarboxylate transporter substrate binding protein no 0.58
    3 ABID97_RS00090 ChaN family lipoprotein 0.41 0.54
    4 ABID97_RS00065 M48 family metalloprotease 0.46 0.54
    5 ABID97_RS02615 SDR family oxidoreductase no 0.54
    6 ABID97_RS00055 FAD-dependent monooxygenase no 0.54
    7 ABID97_RS14140 propionate--CoA ligase 0.46 0.54
    8 ABID97_RS06120 alpha/beta hydrolase-fold protein no 0.53
    9 ABID97_RS01100 ABC transporter ATP-binding protein no 0.53
    10 ABID97_RS00050 hypothetical protein no 0.53
    11 ABID97_RS02585 ion transporter no 0.53
    12 ABID97_RS06075 NAD(P)/FAD-dependent oxidoreductase 0.47 0.53
    13 ABID97_RS00040 hypothetical protein no 0.52
    14 ABID97_RS00045 tripartite tricarboxylate transporter substrate binding protein no 0.51
    15 ABID97_RS05575 SDR family oxidoreductase no 0.50
    16 ABID97_RS05005 serine/threonine-protein kinase no 0.50
    17 ABID97_RS06090 RNA pseudouridine synthase 0.39 0.49
    18 ABID97_RS17420 cobyrinate a,c-diamide synthase 0.77 0.49
    19 ABID97_RS03335 TetR/AcrR family transcriptional regulator no 0.49
    20 ABID97_RS00075 DUF3108 domain-containing protein no 0.49

    Or look for negative cofitness