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  • Top cofit genes for ABID97_RS05970 from Variovorax sp. OAS795

    TRAP transporter small permease
    SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS16640 PilT/PilU family type 4a pilus ATPase no 0.38
    2 ABID97_RS00600 GNAT family N-acetyltransferase 0.40 0.35
    3 ABID97_RS06295 monofunctional biosynthetic peptidoglycan transglycosylase no 0.34
    4 ABID97_RS10655 alpha/beta hydrolase no 0.33
    5 ABID97_RS02525 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA no 0.33
    6 ABID97_RS10555 transglutaminase family protein no 0.32
    7 ABID97_RS17255 SIMPL domain-containing protein no 0.32
    8 ABID97_RS15805 hypothetical protein no 0.31
    9 ABID97_RS26340 ABC transporter permease no 0.31
    10 ABID97_RS01970 PhoX family phosphatase no 0.30
    11 ABID97_RS01680 GDP-mannose pyrophosphatase no 0.30
    12 ABID97_RS10715 5'/3'-nucleotidase SurE no 0.30
    13 ABID97_RS09420 carbon monoxide dehydrogenase subunit G no 0.30
    14 ABID97_RS11460 2-hydroxychromene-2-carboxylate isomerase no 0.29
    15 ABID97_RS23555 urease accessory protein UreG no 0.28
    16 ABID97_RS08105 ATP-binding cassette domain-containing protein no 0.28
    17 ABID97_RS18330 hypothetical protein no 0.28
    18 ABID97_RS24675 YqgE/AlgH family protein no 0.28
    19 ABID97_RS20095 DNA topoisomerase IV subunit B no 0.28
    20 ABID97_RS16695 Tol-Pal system beta propeller repeat protein TolB no 0.27

    Or look for negative cofitness