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  • Top cofit genes for ABID97_RS05065 from Variovorax sp. OAS795

    type VI secretion system ATPase TssH
    SEED: ClpB protein
    KEGG: type VI secretion system protein VasG

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS14615 phosphate signaling complex protein PhoU 0.53 0.80
    2 ABID97_RS14495 hypothetical protein no 0.79
    3 ABID97_RS25040 peptide chain release factor 3 no 0.78
    4 ABID97_RS23030 polysaccharide biosynthesis tyrosine autokinase no 0.77
    5 ABID97_RS23045 phosphatase PAP2 family protein no 0.75
    6 ABID97_RS23040 polysaccharide biosynthesis/export family protein no 0.75
    7 ABID97_RS14505 hypothetical protein no 0.75
    8 ABID97_RS02340 ATP-dependent RNA helicase DbpA no 0.75
    9 ABID97_RS21440 cyclic peptide export ABC transporter no 0.74
    10 ABID97_RS23050 large conductance mechanosensitive channel protein MscL 0.64 0.73
    11 ABID97_RS02170 hypothetical protein no 0.71
    12 ABID97_RS00880 AMP nucleosidase 0.54 0.70
    13 ABID97_RS05740 glycosyltransferase family A protein no 0.70
    14 ABID97_RS23055 4-hydroxythreonine-4-phosphate dehydrogenase PdxA no 0.69
    15 ABID97_RS23000 YjbH domain-containing protein no 0.69
    16 ABID97_RS23060 Nif3-like dinuclear metal center hexameric protein 0.44 0.69
    17 ABID97_RS22995 YjbF family lipoprotein no 0.68
    18 ABID97_RS00300 helix-turn-helix transcriptional regulator no 0.68
    19 ABID97_RS23025 sugar transferase no 0.67
    20 ABID97_RS23010 hypothetical protein no 0.65

    Or look for negative cofitness