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Cofit
Top cofit genes for ABID97_RS04060 from
Variovorax sp. OAS795
IclR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABID97
_RS25285
asparaginase
no
0.29
2
ABID97
_RS25060
ornithine cyclodeaminase
no
0.29
3
ABID97
_RS07525
molybdate ABC transporter permease subunit
no
0.29
4
ABID97
_RS00890
helix-turn-helix transcriptional regulator
no
0.28
5
ABID97
_RS03985
hypothetical protein
no
0.28
6
ABID97
_RS24785
MOSC N-terminal beta barrel domain-containing protein
no
0.28
7
ABID97
_RS01685
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
no
0.28
8
ABID97
_RS01985
OmpA family protein
no
0.27
9
ABID97
_RS16805
hypothetical protein
no
0.27
10
ABID97
_RS09990
LysR family transcriptional regulator
no
0.27
11
ABID97
_RS19600
TRAP transporter substrate-binding protein
no
0.27
12
ABID97
_RS17225
polyhydroxyalkanoate synthesis repressor PhaR
no
0.26
13
ABID97
_RS23985
tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL
no
0.26
14
ABID97
_RS29100
GreA/GreB family elongation factor
no
0.26
15
ABID97
_RS17540
NAD(P)-dependent oxidoreductase
no
0.25
16
ABID97
_RS29140
MarR family transcriptional regulator
no
0.25
17
ABID97
_RS07535
ATP-binding cassette domain-containing protein
no
0.25
18
ABID97
_RS20675
LysR family transcriptional regulator
no
0.24
19
ABID97
_RS12725
pyrroloquinoline-quinone synthase PqqC
no
0.24
20
ABID97
_RS18015
LysR family transcriptional regulator
no
0.24
Or look for
negative cofitness