Top cofit genes for ABID97_RS03110 from Variovorax sp. OAS795

helix-turn-helix transcriptional regulator
SEED: Regulatory protein of benzoate catabolism
KEGG: shikimate kinase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	ABID97_RS03115		2,3-epoxybenzoyl-CoA dihydrolase	0.41	0.81
2	ABID97_RS14625		phosphate regulon sensor histidine kinase PhoR	no	0.74
3	ABID97_RS23330		c-type cytochrome	no	0.74
4	ABID97_RS11640		TetR family transcriptional regulator	no	0.72
5	ABID97_RS03125		benzoyl-CoA 2,3-epoxidase subunit BoxA	0.51	0.71
6	ABID97_RS23920		COX15/CtaA family protein	0.72	0.70
7	ABID97_RS23965		cytochrome c oxidase subunit II	0.64	0.70
8	ABID97_RS23940		cytochrome c oxidase subunit 3	0.60	0.69
9	ABID97_RS23960		cytochrome c oxidase subunit I	0.69	0.69
10	ABID97_RS12440		CaiB/BaiF CoA-transferase family protein	no	0.68
11	ABID97_RS23950		cytochrome c oxidase assembly protein	0.51	0.68
12	ABID97_RS14095		PAS domain S-box protein	0.63	0.67
13	ABID97_RS23925		hypothetical protein	no	0.66
14	ABID97_RS23915		heme o synthase	0.56	0.65
15	ABID97_RS23930		SURF1 family protein	0.63	0.65
16	ABID97_RS22760		TetR/AcrR family transcriptional regulator	0.59	0.64
17	ABID97_RS02460		aminopeptidase P N-terminal domain-containing protein	0.48	0.64
18	ABID97_RS24500		oxalyl-CoA decarboxylase	no	0.63
19	ABID97_RS13570		IclR family transcriptional regulator	0.49	0.63
20	ABID97_RS19065		GntR family transcriptional regulator	no	0.62

Or look for negative cofitness