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  • Top cofit genes for ABID97_RS02790 from Variovorax sp. OAS795

    penicillin-binding protein 1A
    SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS16690 peptidoglycan-associated lipoprotein Pal 0.28 0.65
    2 ABID97_RS17065 DUF4149 domain-containing protein no 0.65
    3 ABID97_RS06185 ATP-dependent protease ATPase subunit HslU 0.67 0.59
    4 ABID97_RS08695 permease no 0.59
    5 ABID97_RS23970 DUF2244 domain-containing protein no 0.57
    6 ABID97_RS14975 hypothetical protein no 0.57
    7 ABID97_RS06755 putative Na+/H+ antiporter no 0.57
    8 ABID97_RS21150 FAD-dependent oxidoreductase no 0.53
    9 ABID97_RS08330 RNA polymerase sigma factor RpoE no 0.53
    10 ABID97_RS02775 VIT and VWA domain-containing protein no 0.53
    11 ABID97_RS01645 helix-turn-helix transcriptional regulator no 0.53
    12 ABID97_RS15570 sulfate ABC transporter substrate-binding protein no 0.53
    13 ABID97_RS25015 methylenetetrahydrofolate reductase [NAD(P)H] 0.87 0.53
    14 ABID97_RS10695 YbhB/YbcL family Raf kinase inhibitor-like protein no 0.53
    15 ABID97_RS09180 DNA polymerase I 0.30 0.52
    16 ABID97_RS05250 anthranilate synthase component I 0.88 0.52
    17 ABID97_RS17055 YhbY family RNA-binding protein no 0.52
    18 ABID97_RS17200 ribonuclease R 0.72 0.52
    19 ABID97_RS14160 cell division protein ZapE 0.42 0.51
    20 ABID97_RS15370 phosphoadenosine phosphosulfate reductase family protein no 0.51

    Or look for negative cofitness