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  • Top cofit genes for ABID97_RS01915 from Variovorax sp. OAS795

    RidA family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS20675 LysR family transcriptional regulator no 0.40
    2 ABID97_RS22890 ABC transporter substrate-binding protein no 0.36
    3 ABID97_RS02355 tripartite tricarboxylate transporter substrate-binding protein 0.49 0.35
    4 ABID97_RS19660 hypothetical protein no 0.35
    5 ABID97_RS28625 MaoC family dehydratase N-terminal domain-containing protein no 0.34
    6 ABID97_RS24215 response regulator transcription factor no 0.33
    7 ABID97_RS24010 amidohydrolase family protein no 0.33
    8 ABID97_RS04100 chromate efflux transporter no 0.32
    9 ABID97_RS20810 hypothetical protein no 0.32
    10 ABID97_RS11670 ABC transporter permease no 0.31
    11 ABID97_RS02960 helix-turn-helix domain-containing protein no 0.31
    12 ABID97_RS13650 hydrogenase expression/formation protein no 0.30
    13 ABID97_RS20050 amino acid ABC transporter permease no 0.30
    14 ABID97_RS24905 phosphatidate cytidylyltransferase no 0.29
    15 ABID97_RS27395 5-oxoprolinase subunit PxpA no 0.29
    16 ABID97_RS06045 NYN domain-containing protein no 0.28
    17 ABID97_RS12405 peptidoglycan editing factor PgeF no 0.28
    18 ABID97_RS06295 monofunctional biosynthetic peptidoglycan transglycosylase no 0.28
    19 ABID97_RS10565 phasin family protein 0.26 0.28
    20 ABID97_RS17760 hypothetical protein no 0.28

    Or look for negative cofitness