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  • Top cofit genes for ABID97_RS01765 from Variovorax sp. OAS795

    LysR family transcriptional regulator
    SEED: Chromosome initiation inhibitor

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS01770 VOC family protein no 0.56
    2 ABID97_RS07070 ABC transporter substrate-binding protein no 0.54
    3 ABID97_RS21440 cyclic peptide export ABC transporter no 0.52
    4 ABID97_RS10925 Bug family tripartite tricarboxylate transporter substrate binding protein no 0.50
    5 ABID97_RS23060 Nif3-like dinuclear metal center hexameric protein no 0.50
    6 ABID97_RS03485 GtrA family protein no 0.49
    7 ABID97_RS03475 hypothetical protein no 0.49
    8 ABID97_RS22995 YjbF family lipoprotein no 0.49
    9 ABID97_RS14725 transglycosylase SLT domain-containing protein no 0.48
    10 ABID97_RS23010 hypothetical protein no 0.48
    11 ABID97_RS19085 amino acid adenylation domain-containing protein no 0.48
    12 ABID97_RS23055 4-hydroxythreonine-4-phosphate dehydrogenase PdxA no 0.47
    13 ABID97_RS23860 RsmD family RNA methyltransferase no 0.47
    14 ABID97_RS23235 SAM-dependent methyltransferase no 0.46
    15 ABID97_RS23050 large conductance mechanosensitive channel protein MscL no 0.46
    16 ABID97_RS17215 YkvA family protein no 0.46
    17 ABID97_RS06490 efflux RND transporter permease subunit no 0.46
    18 ABID97_RS21375 TolC family outer membrane protein no 0.46
    19 ABID97_RS19120 polysaccharide biosynthesis tyrosine autokinase no 0.45
    20 ABID97_RS02170 hypothetical protein no 0.45

    Or look for negative cofitness