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  • Top cofit genes for ABID97_RS01340 from Variovorax sp. OAS795

    RidA family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS04265 3-hydroxybenzoate 6-monooxygenase no 0.43
    2 ABID97_RS08430 tryptophan synthase subunit beta no 0.39
    3 ABID97_RS02205 Wzy polymerase domain-containing protein no 0.38
    4 ABID97_RS02210 pilin no 0.38
    5 ABID97_RS14215 type IV pilus biogenesis/stability protein PilW no 0.38
    6 ABID97_RS28725 hypothetical protein no 0.37
    7 ABID97_RS23265 type IV pilus secretin PilQ no 0.37
    8 ABID97_RS23380 lytic transglycosylase domain-containing protein no 0.36
    9 ABID97_RS06450 glucans biosynthesis glucosyltransferase MdoH no 0.36
    10 ABID97_RS08245 Rne/Rng family ribonuclease no 0.36
    11 ABID97_RS23285 pilus assembly protein PilM no 0.36
    12 ABID97_RS18205 XRE family transcriptional regulator no 0.36
    13 ABID97_RS23280 PilN domain-containing protein no 0.35
    14 ABID97_RS02200 nucleoside-diphosphate sugar epimerase/dehydratase no 0.35
    15 ABID97_RS08195 histidine kinase no 0.35
    16 ABID97_RS23275 type 4a pilus biogenesis protein PilO no 0.35
    17 ABID97_RS07640 ubiquinol oxidase subunit II no 0.35
    18 ABID97_RS01825 LysM peptidoglycan-binding domain-containing protein no 0.35
    19 ABID97_RS19910 DUF3488 and transglutaminase-like domain-containing protein no 0.35
    20 ABID97_RS02130 type IV pilin protein no 0.35

    Or look for negative cofitness