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  • Top cofit genes for ABID97_RS00890 from Variovorax sp. OAS795

    helix-turn-helix transcriptional regulator
    SEED: Transcriptional regulator, ArsR family

    Rank Hit Name Description Conserved? Cofitness  
    1 ABID97_RS05990 oxepin-CoA hydrolase, alternative type no 0.40
    2 ABID97_RS09155 DUF2339 domain-containing protein no 0.40
    3 ABID97_RS17785 hypothetical protein no 0.37
    4 ABID97_RS23850 5-oxoprolinase subunit PxpB 0.18 0.36
    5 ABID97_RS28820 tripartite tricarboxylate transporter substrate binding protein no 0.34
    6 ABID97_RS18210 hypothetical protein no 0.31
    7 ABID97_RS14390 tripartite tricarboxylate transporter permease no 0.31
    8 ABID97_RS15960 alpha/beta hydrolase 0.21 0.31
    9 ABID97_RS01775 alpha/beta hydrolase no 0.30
    10 ABID97_RS14125 PQQ-dependent sugar dehydrogenase 0.27 0.30
    11 ABID97_RS06730 zinc-dependent alcohol dehydrogenase 0.25 0.30
    12 ABID97_RS24805 enoyl-CoA hydratase no 0.29
    13 ABID97_RS00200 DUF4129 domain-containing protein no 0.29
    14 ABID97_RS19860 DUF2167 domain-containing protein no 0.29
    15 ABID97_RS14565 FAD-dependent oxidoreductase no 0.29
    16 ABID97_RS26655 hypothetical protein no 0.29
    17 ABID97_RS01240 biotin carboxylase N-terminal domain-containing protein no 0.28
    18 ABID97_RS08670 YciI family protein no 0.28
    19 ABID97_RS01795 tripartite tricarboxylate transporter substrate binding protein no 0.28
    20 ABID97_RS04060 IclR family transcriptional regulator no 0.28

    Or look for negative cofitness