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Cofit
Protein
Homologs
Top cofit genes for ABI39_RS10315 from
Phocaeicola dorei CL03T12C01
RagB/SusD family nutrient uptake outer membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABI39
_RS10310
TonB-dependent receptor
no
0.90
2
ABI39
_RS21300
cyclically-permuted mutarotase family protein
no
0.82
3
ABI39
_RS21195
AGE family epimerase/isomerase
no
0.77
4
ABI39
_RS02905
SusD family outer membrane lipoprotein NanU
no
0.59
5
ABI39
_RS21340
TonB-dependent receptor
no
0.55
6
ABI39
_RS10300
RNA polymerase sigma-70 factor
no
0.52
7
ABI39
_RS10320
hypothetical protein
0.35
0.52
8
ABI39
_RS21200
MFS transporter
no
0.52
9
ABI39
_RS21335
SusD family outer membrane lipoprotein NanU
no
0.51
10
ABI39
_RS21330
exo-alpha-sialidase
no
0.46
11
ABI39
_RS21190
dihydrodipicolinate synthase family protein
0.32
0.45
12
ABI39
_RS06375
6-phosphofructokinase
no
0.44
13
ABI39
_RS10160
FecR domain-containing protein
no
0.43
14
ABI39
_RS06210
glycosyltransferase family 8 protein
no
0.43
15
ABI39
_RS06215
glycosyltransferase family 2 protein
no
0.42
16
ABI39
_RS13180
FAD:protein FMN transferase
no
0.40
17
ABI39
_RS00095
elongation factor G
no
0.36
18
ABI39
_RS16875
NADH:ubiquinone reductase (Na(+)-transporting) subunit B
no
0.35
19
ABI39
_RS06180
glycosyltransferase family 2 protein
no
0.34
20
ABI39
_RS14780
alpha-1,2-fucosyltransferase
no
0.34
Or look for
negative cofitness