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Cofit
Protein
Homologs
Top cofit genes for ABI39_RS09065 from
Phocaeicola dorei CL03T12C01
TonB-dependent receptor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ABI39
_RS09170
response regulator
0.94
0.87
2
ABI39
_RS09070
RagB/SusD family nutrient uptake outer membrane protein
0.97
0.81
3
ABI39
_RS09120
TonB-dependent receptor
no
0.56
4
ABI39
_RS09040
MFS transporter
0.74
0.53
5
ABI39
_RS09815
hypothetical protein
no
0.49
6
ABI39
_RS15480
tagaturonate reductase
0.38
0.45
7
ABI39
_RS15375
sugar kinase
no
0.45
8
ABI39
_RS15475
glucuronate isomerase
0.53
0.42
9
ABI39
_RS17440
DUF1460 domain-containing protein
no
0.40
10
ABI39
_RS15365
altronate dehydratase
0.63
0.38
11
ABI39
_RS02990
rhamnulokinase
no
0.38
12
ABI39
_RS09125
RagB/SusD family nutrient uptake outer membrane protein
no
0.36
13
ABI39
_RS09110
RNA polymerase sigma-70 factor
no
0.36
14
ABI39
_RS15380
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
no
0.34
15
ABI39
_RS20900
endolytic transglycosylase MltG
no
0.34
16
ABI39
_RS06800
DEAD/DEAH box helicase family protein
no
0.34
17
ABI39
_RS20760
IS66 family transposase
no
0.33
18
ABI39
_RS09080
TonB-dependent receptor
no
0.32
19
ABI39
_RS23065
hypothetical protein
no
0.32
20
ABI39
_RS06790
site-specific DNA-methyltransferase
no
0.31
Or look for
negative cofitness